Index

_

__init__() (ComBat method) (NestedComBat method) (TransductiveComBat method)

B

batch_var_after_ (NestedComBat attribute)

batch_var_before_ (NestedComBat attribute) batch_variance_explained() (in module combatlearn.inspection)

C

ComBat (class in combatlearn) combatlearn.inspection module combatlearn.metrics module

combatlearn.visualization module compute_batch_metrics() (in module combatlearn.metrics)

F

feature_batch_diagnostics() (in module combatlearn.inspection) fit() (ComBat method) (NestedComBat method) (TransductiveComBat method)

fit_transform() (TransductiveComBat method)

G

get_feature_names_out() (ComBat method) (NestedComBat method)

M

module combatlearn.inspection combatlearn.metrics combatlearn.visualization

N

NestedComBat (class in combatlearn)

O

order_ (NestedComBat attribute)

P

plot_batch_effect_heatmap() (in module combatlearn.visualization)

plot_feature_diagnostics() (in module combatlearn.visualization) plot_transformation() (in module combatlearn.visualization)

S

summary() (in module combatlearn.inspection)

T

TransductiveComBat (class in combatlearn.transductive) transform() (ComBat method) (NestedComBat method) (TransductiveComBat method)

U

used_greedy_ (NestedComBat attribute)